Bioconductor Single Package Builder - Build History
merida1 Summary
Package: GenProSeq |
Version: 0.99.9 |
RVersion: 4.2 |
BiocVersion: 3.15 |
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GenProSeq |
BuildTime: 0 minutes 34.09 seconds |
CheckCommand: |
CheckTime: |
BuildBinCommand: |
BuildBinTime: |
PackageFileSize: -1.00 KiB |
BuildID:: GenProSeq_20211201132231 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: GenProSeq. Starting Build package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1. |
merida1 BUILD SRC output
=============================== R CMD BUILD =============================== * checking for file ‘GenProSeq/DESCRIPTION’ ... OK * preparing ‘GenProSeq’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘GenProSeq.Rmd’ using rmarkdown Quitting from lines 55-80 (GenProSeq.Rmd) Error: processing vignette 'GenProSeq.Rmd' failed with diagnostics: 'example_PTEN' is not an exported object from 'namespace:GenProSeq' --- failed re-building ‘GenProSeq.Rmd’ SUMMARY: processing the following file failed: ‘GenProSeq.Rmd’ Error: Vignette re-building failed. Execution halted
merida1 CHECK output
merida1 BUILD BIN output
nebbiolo1 Summary
Package: GenProSeq |
Version: 0.99.9 |
RVersion: 4.2 |
BiocVersion: 3.15 |
BuildCommand: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenProSeq |
BuildTime: 0 minutes 14.28 seconds |
CheckCommand: |
CheckTime: |
BuildBinCommand: |
BuildBinTime: |
PackageFileSize: -1.00 KiB |
BuildID:: GenProSeq_20211201132231 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: GenProSeq. Starting Build package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1. |
nebbiolo1 BUILD SRC output
=============================== R CMD BUILD =============================== * checking for file ‘GenProSeq/DESCRIPTION’ ... OK * preparing ‘GenProSeq’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘GenProSeq.Rmd’ using rmarkdown 2021-12-01 08:23:08.330292: I tensorflow/stream_executor/platform/default/dso_loader.cc:48] Successfully opened dynamic library libcudart.so.10.1 Quitting from lines 55-80 (GenProSeq.Rmd) Error: processing vignette 'GenProSeq.Rmd' failed with diagnostics: 'example_PTEN' is not an exported object from 'namespace:GenProSeq' --- failed re-building ‘GenProSeq.Rmd’ SUMMARY: processing the following file failed: ‘GenProSeq.Rmd’ Error: Vignette re-building failed. Execution halted