Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/LinTInd

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
merida1	macOS 10.14.6 Mojave/x86_64	ERROR	skipped	skipped	skipped
nebbiolo1	Linux (Ubuntu 20.04.4 LTS)/x86_64	ERROR	skipped	skipped	skipped

merida1 Summary

[top]

Package: LinTInd

Version: 0.99.0

RVersion: 4.2

BiocVersion: 3.15

BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data LinTInd

BuildTime: 0 minutes 0.76 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: LinTInd_20220106190147

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: LinTInd. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 1. Checking git clone status: 1. Installing package status: 1. Build Package status: 1.

merida1 BUILD SRC output

[top]

===============================

 R CMD BUILD

===============================

* checking for file ‘LinTInd/DESCRIPTION’ ... OK
* preparing ‘LinTInd’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘ggplot2’, ‘data.tree’, ‘reshape2’, ‘networkD3’, ‘ape’, ‘cowplot’, ‘ggnewscale’, ‘rlist’, ‘pheatmap’, ‘ggtree’ are not available for package ‘LinTInd’
* removing ‘/private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/Rtmp5wFQxa/Rinst105c31446361/LinTInd’
      -----------------------------------
ERROR: package installation failed

merida1 CHECK output

[top]

merida1 BUILD BIN output

[top]

nebbiolo1 Summary

[top]

Package: LinTInd

Version: 0.99.0

RVersion: 4.2

BiocVersion: 3.15

BuildCommand: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data LinTInd

BuildTime: 0 minutes 4.35 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: LinTInd_20220106190147

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: LinTInd. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 1. Installing package status: 1. Build Package status: 1.

nebbiolo1 BUILD SRC output

[top]

===============================

 R CMD BUILD

===============================

* checking for file ‘LinTInd/DESCRIPTION’ ... OK
* preparing ‘LinTInd’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘LinTInd’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
[1] "Node$fields will be deprecated in the next release. Please use Node$attributes instead."
[1] "Node$fieldsAll will be deprecated in the next release. Please use Node$attributesAll instead."
** inst
** byte-compile and prepare package for lazy loading
Error in library(circlize) : there is no package called ‘circlize’
Error: unable to load R code in package ‘LinTInd’
Execution halted
ERROR: lazy loading failed for package ‘LinTInd’
* removing ‘/tmp/Rtmpc5ZEfS/Rinst3c79e079342ebe/LinTInd’
      -----------------------------------
ERROR: package installation failed

nebbiolo1 CHECK output

[top]

nebbiolo1 BUILD BIN output

[top]