Bioconductor Single Package Builder - Build History

Snapshot Date: 
URL:  https://git.bioconductor.org/packages/octad.db
Last Changed Rev:  / Revision: 
Last Changed Date: 

Hostname OS /Arch BUILD CHECK BUILD BIN POST-PROCESSING
merida1 macOS 10.14.6 Mojave/x86_64   ERROR     skipped     skipped     skipped  
nebbiolo1 Linux (Ubuntu 20.04.4 LTS)/x86_64   ERROR     skipped     skipped     skipped  

merida1 Summary

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Package: octad.db
Version: 0.99.17
RVersion: 4.2
BiocVersion: 3.15
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data octad.db
BuildTime: 0 minutes 3.56 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: octad.db_20220120234417
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: octad.db. Starting Build package.
PostProcessing: Finished Git clone. Package type: ExperimentData. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

merida1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘octad.db/DESCRIPTION’ ... OK
* preparing ‘octad.db’:
* checking DESCRIPTION meta-information ... OK
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:4: unexpected macro '\describe'
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/sRGES_example.Rd:4: unexpected macro '\describe'
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘octad.db’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:4: unexpected macro '\describe'
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:1: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:2: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:3: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:4: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:5: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:5: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:5: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:6: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:6: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:6: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:7: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:7: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:7: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:8: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:8: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:8: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:9: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:9: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:9: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:10: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:10: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:10: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:11: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:11: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:11: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:12: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:12: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:12: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:13: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:13: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:13: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:14: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:14: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:14: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:15: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:15: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:15: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:16: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:16: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:16: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:17: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:17: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:17: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:18: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:18: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:18: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:19: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:19: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:19: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:20: All text must be in a section
Warning: /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd:21: All text must be in a section
Error : /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rbuild23fa179af4e3/octad.db/man/res_example.Rd: Sections \title, and \name must exist and be unique in Rd files
ERROR: installing Rd objects failed for package ‘octad.db’
* removing ‘/private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpM8Ck5f/Rinst23fa3e436f30/octad.db’
      -----------------------------------
ERROR: package installation failed

merida1 CHECK output

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merida1 BUILD BIN output
 
                    			
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nebbiolo1 Summary
 
                			
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Package: octad.db
 
                					
Version: 0.99.17
 
                					
RVersion: 4.2
                
 
                					
BiocVersion: 3.15
                
 

                					
BuildCommand: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data octad.db
 
                					
BuildTime: 0 minutes 1.90 seconds
 
                					
CheckCommand: 

   							
CheckTime: 

                 					
BuildBinCommand: 

 							
BuildBinTime: 

                					
PackageFileSize: -1.00 KiB
 
                					
BuildID:: octad.db_20220120234417
 
                					
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: octad.db. Starting Build package. 
 
                					
PostProcessing: Finished Git clone. Package type: ExperimentData. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1. 
        				
                				
 
                			
 
                			
 
                			    
                				
nebbiolo1 BUILD SRC output
 
                    			
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===============================

 R CMD BUILD

===============================

* checking for file ‘octad.db/DESCRIPTION’ ... OK
* preparing ‘octad.db’:
* checking DESCRIPTION meta-information ... OK
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:4: unexpected macro '\describe'
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/sRGES_example.Rd:4: unexpected macro '\describe'
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘octad.db’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:4: unexpected macro '\describe'
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:1: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:2: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:3: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:4: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:5: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:5: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:5: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:6: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:6: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:6: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:7: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:7: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:7: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:8: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:8: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:8: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:9: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:9: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:9: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:10: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:10: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:10: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:11: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:11: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:11: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:12: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:12: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:12: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:13: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:13: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:13: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:14: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:14: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:14: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:15: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:15: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:15: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:16: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:16: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:16: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:17: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:17: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:17: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:18: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:18: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:18: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:19: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:19: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:19: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:20: All text must be in a section
Warning: /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd:21: All text must be in a section
Error : /tmp/Rtmp2wVdvR/Rbuild3e1df883c454c/octad.db/man/res_example.Rd: Sections \title, and \name must exist and be unique in Rd files
ERROR: installing Rd objects failed for package ‘octad.db’
* removing ‘/tmp/Rtmp2wVdvR/Rinst3e1df862c745c5/octad.db’
      -----------------------------------
ERROR: package installation failed


                				
 

                			
 
                			    
                				
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