Bioconductor Single Package Builder - Build History
nebbiolo1 Summary
Package: single |
Version: 0.99.7 |
RVersion: 4.2 |
BiocVersion: 3.15 |
BuildCommand: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data single |
BuildTime: 0 minutes 37.96 seconds |
CheckCommand: |
CheckTime: |
BuildBinCommand: |
BuildBinTime: |
PackageFileSize: -1.00 KiB |
BuildID:: single_20220316095151 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: single. Starting Build package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 1. Installing package status: 0. Build Package status: 1. |
nebbiolo1 BUILD SRC output
=============================== R CMD BUILD =============================== * checking for file ‘single/DESCRIPTION’ ... OK * preparing ‘single’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘single.Rnw’ using Sweave Warning: glm.fit: algorithm did not converge Warning: glm.fit: algorithm did not converge Error: processing vignette 'single.Rnw' failed with diagnostics: chunk 11 Error in quality(corrected_reads) : could not find function "quality" --- failed re-building ‘single.Rnw’ SUMMARY: processing the following file failed: ‘single.Rnw’ Error: Vignette re-building failed. Execution halted
nebbiolo1 CHECK output
nebbiolo1 BUILD BIN output
merida1 Summary
Package: single |
Version: 0.99.7 |
RVersion: 4.2 |
BiocVersion: 3.15 |
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data single |
BuildTime: 1 minutes 46.80 seconds |
CheckCommand: |
CheckTime: |
BuildBinCommand: |
BuildBinTime: |
PackageFileSize: -1.00 KiB |
BuildID:: single_20220316095151 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: single. Starting Build package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 1. Installing package status: 0. Build Package status: 1. |
merida1 BUILD SRC output
=============================== R CMD BUILD =============================== * checking for file ‘single/DESCRIPTION’ ... OK * preparing ‘single’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘single.Rnw’ using Sweave Warning: glm.fit: algorithm did not converge Warning: glm.fit: algorithm did not converge Error: processing vignette 'single.Rnw' failed with diagnostics: chunk 11 Error in quality(corrected_reads) : could not find function "quality" --- failed re-building ‘single.Rnw’ SUMMARY: processing the following file failed: ‘single.Rnw’ Error: Vignette re-building failed. Execution halted