nebbiolo1 Summary
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Package: APL |
Version: 0.99.2 |
RVersion: 4.2
|
BiocVersion: 3.15
|
BuildCommand: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data APL |
BuildTime: 2 minutes 47.30 seconds |
CheckCommand: BiocCheckGitClone('APL') && /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD check --no-vignettes --timings APL_0.99.2.tar.gz && BiocCheck('APL_0.99.2.tar.gz', `new-package`=TRUE) |
CheckTime: 3 minutes 48.27 seconds |
BuildBinCommand: |
BuildBinTime: |
PackageFileSize: 7922.50 KiB |
BuildID:: APL_20220401131744 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: APL. Starting Build package. Starting Check package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 0. Checking Package status: 1. |
nebbiolo1 BUILD SRC output
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===============================
R CMD BUILD
===============================
* checking for file ‘APL/DESCRIPTION’ ... OK
* preparing ‘APL’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘APL_0.99.2.tar.gz’
nebbiolo1 CHECK output
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===============================
BiocCheckGitClone('APL')
===============================
This is BiocCheckGitClone version 1.31.36. BiocCheckGitClone is a work
in progress. Output and severity of issues may change.
* Checking valid files...
* Checking DESCRIPTION...
* Checking if DESCRIPTION is well formatted...
* Checking for valid maintainer...
* Checking CITATION...
* Checking that provided CITATION file is correctly formatted...
Summary:
ERROR count: 0
WARNING count: 0
NOTE count: 0
For detailed information about these checks, see the BiocCheck
vignette, available at
https://bioconductor.org/packages/3.15/bioc/vignettes/BiocCheck/inst/doc/BiocCheck.html#interpreting-bioccheck-output
===============================
R CMD CHECK
===============================
* using log directory ‘/home/pkgbuild/packagebuilder/workers/jobs/2465/b12d39d69effb21345f3e1a049543053a49e7c1c/APL.Rcheck’
* using R Under development (unstable) (2022-03-17 r81925)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘APL/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘APL’ version ‘0.99.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘APL’ can be installed ... [27s/27s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [26s/26s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [30s/30s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’ [9s/9s]
[9s/9s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 20 lines of output:
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test-CA.R:20:1): (code run outside of `test_that()`) ─────────────────
<Rcpp::exception/C++Error/error/condition>
Error in `py_run_file_impl(file, local, convert)`: ModuleNotFoundError: No module named 'torch'
Detailed traceback:
File "<string>", line 3, in <module>
File "/home/biocbuild/bbs-3.15-bioc/R/library/reticulate/python/rpytools/loader.py", line 39, in _import_hook
module = _import(
Backtrace:
▆
1. ├─APL::cacomp(...) at test-CA.R:20:0
2. └─APL::cacomp(...)
3. └─APL:::run_cacomp(...)
4. └─reticulate::source_python(...)
5. └─reticulate::py_run_file(file, local = FALSE, convert = convert)
6. └─reticulate:::py_run_file_impl(file, local, convert)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 14 ]
Error: Test failures
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR
See
‘/home/pkgbuild/packagebuilder/workers/jobs/2465/b12d39d69effb21345f3e1a049543053a49e7c1c/APL.Rcheck/00check.log’
for details.
===============================
BiocCheck('APL_0.99.2.tar.gz')
===============================
This is BiocCheck version 1.31.36. BiocCheck is a work in progress.
Output and severity of issues may change. Installing package...
* Checking Package Dependencies...
Warning in system2(cmd, args, stdout = TRUE, stderr = FALSE, env = "R_DEFAULT_PACKAGES=NULL") :
running command 'R_DEFAULT_PACKAGES=NULL '/home/biocbuild/bbs-3.15-bioc/R/bin/R' -q --vanilla --slave -f /home/biocbuild/bbs-3.15-bioc/R/library/BiocCheck/script/checkBadDeps.R --args "/home/pkgbuild/packagebuilder/workers/jobs/2465/b12d39d69effb21345f3e1a049543053a49e7c1c/APL_0.99.2.tar.gz" "/tmp/RtmpHOzAT1/file2e063c6d48654/lib" 2>/dev/null' had status 1
* Checking if other packages can import this one...
* Checking to see if we understand object initialization...
* Checking for deprecated package usage...
* Checking for remote package usage...
* Checking for 'LazyData: true' usage...
* Checking version number...
* Checking for version number mismatch...
* Checking new package version number...
* Checking R Version dependency...
* Checking package size...
* ERROR: Package Source tarball exceeds Bioconductor size
requirement.
Package Size: 8.1126 MB
Size Requirement: 5.0000 MB
* Checking individual file sizes...
* Checking biocViews...
* Checking that biocViews are present...
* Checking package type based on biocViews...
Software
* Checking for non-trivial biocViews...
* Checking that biocViews come from the same category...
* Checking biocViews validity...
* Checking for recommended biocViews...
* Checking build system compatibility...
* Checking for blank lines in DESCRIPTION...
* Checking if DESCRIPTION is well formatted...
* Checking for proper Description: field...
* Checking for whitespace in DESCRIPTION field names...
* Checking that Package field matches directory/tarball name...
* Checking for Version field...
* Checking for valid maintainer...
* Checking License: for restrictive use...
* NOTE: License 'GPL (>= 3)' unknown; licenses cannot restrict use
* Checking for pinned package versions...
* Checking DESCRIPTION/NAMESPACE consistency...
* Checking .Rbuildignore...
* Checking vignette directory...
* Checking whether vignette is built with 'R CMD build'...
* Checking package installation calls in R code...
* Checking for library/require of APL...
* Checking coding practice...
* NOTE: Avoid 'cat' and 'print' outside of 'show' methods
Found in files:
cat() in R/generic_methods.R (line 24, column 5)
cat() in R/generic_methods.R (line 32, column 5)
cat() in R/generic_methods.R (line 35, column 3)
cat() in R/generic_methods.R (line 42, column 3)
cat() in R/generic_methods.R (line 49, column 3)
cat() in R/generic_methods.R (line 58, column 5)
* NOTE: Avoid using '=' for assignment and use '<-' instead
Found in files:
R/apl.R (line 985, column 25)
R/apl.R (line 1203, column 25)
R/apl.R (line 1294, column 25)
R/CA.R (line 330, column 25)
R/CA.R (line 402, column 25)
R/CA.R (line 495, column 25)
R/CA.R (line 943, column 25)
R/CA.R (line 1031, column 25)
R/CA.R (line 1094, column 25)
R/convert.R (line 238, column 42)
R/convert.R (line 269, column 25)
R/convert.R (line 306, column 25)
R/convert.R (line 354, column 25)
R/plot.R (line 58, column 25)
R/plot.R (line 154, column 25)
R/plot.R (line 185, column 25)
R/plot.R (line 275, column 25)
R/plot.R (line 424, column 25)
R/plot.R (line 455, column 25)
* Checking parsed R code in R directory, examples, vignettes...
* NOTE: Avoid 'suppressWarnings'/'*Messages' if possible (found 1
times)
suppressWarnings() in R/apl.R (line 217, column 7)
* Checking function lengths...
* NOTE: Recommended function length <= 50 lines.
There are 17 functions > 50 lines.
The longest 5 functions are:
check_cacomp() (R/constructor.R, line 24): 226 lines
recompute() (R/convert.R, line 20): 187 lines
_anonymous_.986() (R/apl.R, line 986): 180 lines
apl_plotly() (R/apl.R, line 551): 153 lines
_anonymous_.276() (R/plot.R, line 276): 143 lines
* Checking man page documentation...
* Checking package NEWS...
* Checking unit tests...
* Checking skip_on_bioc() in tests...
* Checking formatting of DESCRIPTION, NAMESPACE, man pages, R source,
and vignette source...
* NOTE: Consider shorter lines; 113 lines (2%) are > 80 characters
long.
First 6 lines:
R/apl.R:1111 stopifnot("Cannot use scree plot to pick dimensions"...
R/apl.R:1172 message("\nBoth dims and pd_use set. Using dimen...
R/CA.R:225 reticulate::source_python(system.file("python/python_svd...
R/CA.R:464 stopifnot("Set coords = TRUE when inputting a Seurat objec...
R/CA.R:484 obj[["CA"]] <- Seurat::CreateDimReducObject(embeddings =...
R/CA.R:485 loadings = ca...
* NOTE: Consider 4 spaces instead of tabs; 3 lines (0%) contain
tabs.
First 3 lines:
R/CA.R:109 chisquare <- res$tot * (res$S^2) # chi-square components ...
R/CA.R:943 dim_number <- max_num_dims
R/CA.R:949 dim_number <- length(tmp[cumsum(tmp == 0)<1 & tmp!=0])
* NOTE: Consider multiples of 4 spaces for line indents, 1977
lines(28%) are not.
First 6 lines:
R/apl.R:55 stopifnot(is(caobj, "cacomp"))
R/apl.R:57 rows <- caobj@prin_coords_rows
R/apl.R:58 cols <- caobj@std_coords_cols
R/apl.R:59 cent <- cols
R/apl.R:62 if (is(group, "numeric")){
R/apl.R:64 } else if (is(group, "character")){
See http://bioconductor.org/developers/how-to/coding-style/
See styler package: https://cran.r-project.org/package=styler as
described in the BiocCheck vignette.
* Checking if package already exists in CRAN...
* Checking if new package already exists in Bioconductor...
* Checking for bioc-devel mailing list subscription...
Maintainer is subscribed to bioc-devel.
* Checking for support site registration...
Maintainer is registered at support site.
Package name is in support site watched tags.
Summary:
ERROR count: 1
WARNING count: 0
NOTE count: 8
For detailed information about these checks, see the BiocCheck
vignette, available at
https://bioconductor.org/packages/3.15/bioc/vignettes/BiocCheck/inst/doc/BiocCheck.html#interpreting-bioccheck-output
BiocCheck FAILED.
nebbiolo1 BUILD BIN output
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merida1 Summary
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Package: APL |
Version: 0.99.2 |
RVersion: 4.2
|
BiocVersion: 3.15
|
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data APL |
BuildTime: 12 minutes 40.96 seconds |
CheckCommand: BiocCheckGitClone('APL') && /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch APL_0.99.2.tar.gz && BiocCheck('APL_0.99.2.tar.gz', `new-package`=TRUE) |
CheckTime: 14 minutes 59.96 seconds |
BuildBinCommand: /Users/biocbuild/BBS/utils/build-universal.sh APL_0.99.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R libdir |
BuildBinTime: 2 minutes 37.10 seconds |
PackageFileSize: 7892.79 KiB |
BuildID:: APL_20220401131744 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: APL. Starting Build package. Starting Check package. Starting Build package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 0. Checking Package status: -9. Build Package status: 0. |
merida1 BUILD SRC output
[top]
===============================
R CMD BUILD
===============================
* checking for file ‘APL/DESCRIPTION’ ... OK
* preparing ‘APL’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘APL_0.99.2.tar.gz’
merida1 CHECK output
[top]
===============================
BiocCheckGitClone('APL')
===============================
This is BiocCheckGitClone version 1.31.36. BiocCheckGitClone is a work
in progress. Output and severity of issues may change.
* Checking valid files...
* Checking DESCRIPTION...
* Checking if DESCRIPTION is well formatted...
* Checking for valid maintainer...
* Checking CITATION...
* Checking that provided CITATION file is correctly formatted...
Summary:
ERROR count: 0
WARNING count: 0
NOTE count: 0
For detailed information about these checks, see the BiocCheck
vignette, available at
https://bioconductor.org/packages/3.15/bioc/vignettes/BiocCheck/inst/doc/BiocCheck.html#interpreting-bioccheck-output
===============================
R CMD CHECK
===============================
* using log directory ‘/Users/pkgbuild/packagebuilder/workers/jobs/2465/b12d39d69effb21345f3e1a049543053a49e7c1c/APL.Rcheck’
* using R Under development (unstable) (2022-03-17 r81925)
* using platform: x86_64-apple-darwin17.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘APL/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘APL’ version ‘0.99.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘APL’ can be installed ... [85s/168s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [82s/151s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... ERROR
TIMEOUT: R CMD check exceeded 14 mins
===============================
BiocCheck('APL_0.99.2.tar.gz')
===============================
This is BiocCheck version 1.31.36. BiocCheck is a work in progress.
Output and severity of issues may change. Installing package...
OK
* checking Rd \usage sections ...* Checking Package Dependencies...
Warning in system2(cmd, args, stdout = TRUE, stderr = FALSE, env = "R_DEFAULT_PACKAGES=NULL") :
running command 'R_DEFAULT_PACKAGES=NULL '/Library/Frameworks/R.framework/Resources/bin/R' -q --vanilla --slave -f /Library/Frameworks/R.framework/Versions/4.2/Resources/library/BiocCheck/script/checkBadDeps.R --args "/Users/pkgbuild/packagebuilder/workers/jobs/2465/b12d39d69effb21345f3e1a049543053a49e7c1c/APL_0.99.2.tar.gz" "/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T//RtmpCQgevK/fileac0d480b93e8/lib" 2>/dev/null' had status 1
* Checking if other packages can import this one...
* Checking to see if we understand object initialization...
* Checking for deprecated package usage...
OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ...* Checking for remote package usage...
* Checking for 'LazyData: true' usage...
* Checking version number...
* Checking for version number mismatch...
* Checking new package version number...
* Checking R Version dependency...
* Checking package size...
* ERROR: Package Source tarball exceeds Bioconductor size
requirement.
Package Size: 8.0822 MB
Size Requirement: 5.0000 MB
* Checking individual file sizes...
* Checking biocViews...
* Checking that biocViews are present...
* Checking package type based on biocViews...
Software
* Checking for non-trivial biocViews...
* Checking that biocViews come from the same category...
* Checking biocViews validity...
* Checking for recommended biocViews...
* Checking build system compatibility...
* Checking for blank lines in DESCRIPTION...
* Checking if DESCRIPTION is well formatted...
* Checking for proper Description: field...
* Checking for whitespace in DESCRIPTION field names...
* Checking that Package field matches directory/tarball name...
* Checking for Version field...
* Checking for valid maintainer...
* Checking License: for restrictive use...
* NOTE: License 'GPL (>= 3)' unknown; licenses cannot restrict use
* Checking for pinned package versions...
* Checking DESCRIPTION/NAMESPACE consistency...
* Checking .Rbuildignore...
* Checking vignette directory...
* Checking whether vignette is built with 'R CMD build'...
* Checking package installation calls in R code...
* Checking for library/require of APL...
* Checking coding practice...
* NOTE: Avoid 'cat' and 'print' outside of 'show' methods
Found in files:
cat() in R/generic_methods.R (line 24, column 5)
cat() in R/generic_methods.R (line 32, column 5)
cat() in R/generic_methods.R (line 35, column 3)
cat() in R/generic_methods.R (line 42, column 3)
cat() in R/generic_methods.R (line 49, column 3)
cat() in R/generic_methods.R (line 58, column 5)
* NOTE: Avoid using '=' for assignment and use '<-' instead
Found in files:
R/apl.R (line 985, column 25)
R/apl.R (line 1203, column 25)
R/apl.R (line 1294, column 25)
R/CA.R (line 330, column 25)
R/CA.R (line 402, column 25)
R/CA.R (line 495, column 25)
R/CA.R (line 943, column 25)
R/CA.R (line 1031, column 25)
R/CA.R (line 1094, column 25)
R/convert.R (line 238, column 42)
R/convert.R (line 269, column 25)
R/convert.R (line 306, column 25)
R/convert.R (line 354, column 25)
R/plot.R (line 58, column 25)
R/plot.R (line 154, column 25)
R/plot.R (line 185, column 25)
R/plot.R (line 275, column 25)
R/plot.R (line 424, column 25)
R/plot.R (line 455, column 25)
* Checking parsed R code in R directory, examples, vignettes...
* NOTE: Avoid 'suppressWarnings'/'*Messages' if possible (found 1
times)
suppressWarnings() in R/apl.R (line 217, column 7)
* Checking function lengths...
* NOTE: Recommended function length <= 50 lines.
There are 17 functions > 50 lines.
The longest 5 functions are:
check_cacomp() (R/constructor.R, line 24): 226 lines
recompute() (R/convert.R, line 20): 187 lines
_anonymous_.986() (R/apl.R, line 986): 180 lines
apl_plotly() (R/apl.R, line 551): 153 lines
_anonymous_.276() (R/plot.R, line 276): 143 lines
* Checking man page documentation...
* Checking package NEWS...
* Checking unit tests...
* Checking skip_on_bioc() in tests...
* Checking formatting of DESCRIPTION, NAMESPACE, man pages, R source,
and vignette source...
* NOTE: Consider shorter lines; 113 lines (2%) are > 80 characters
long.
First 6 lines:
R/apl.R:1111 stopifnot("Cannot use scree plot to pick dimensions"...
R/apl.R:1172 message("\nBoth dims and pd_use set. Using dimen...
R/CA.R:225 reticulate::source_python(system.file("python/python_svd...
R/CA.R:464 stopifnot("Set coords = TRUE when inputting a Seurat objec...
R/CA.R:484 obj[["CA"]] <- Seurat::CreateDimReducObject(embeddings =...
R/CA.R:485 loadings = ca...
* NOTE: Consider 4 spaces instead of tabs; 3 lines (0%) contain
tabs.
First 3 lines:
R/CA.R:109 chisquare <- res$tot * (res$S^2) # chi-square components ...
R/CA.R:943 dim_number <- max_num_dims
R/CA.R:949 dim_number <- length(tmp[cumsum(tmp == 0)<1 & tmp!=0])
* NOTE: Consider multiples of 4 spaces for line indents, 1977
lines(28%) are not.
First 6 lines:
R/apl.R:55 stopifnot(is(caobj, "cacomp"))
R/apl.R:57 rows <- caobj@prin_coords_rows
R/apl.R:58 cols <- caobj@std_coords_cols
R/apl.R:59 cent <- cols
R/apl.R:62 if (is(group, "numeric")){
R/apl.R:64 } else if (is(group, "character")){
See http://bioconductor.org/developers/how-to/coding-style/
See styler package: https://cran.r-project.org/package=styler as
described in the BiocCheck vignette.
* Checking if package already exists in CRAN...
* Checking if new package already exists in Bioconductor...
* Checking for bioc-devel mailing list subscription...
Maintainer is subscribed to bioc-devel.
* Checking for support site registration...
Maintainer is registered at support site.
Package name is in support site watched tags.
Summary:
ERROR count: 1
WARNING count: 0
NOTE count: 8
For detailed information about these checks, see the BiocCheck
vignette, available at
https://bioconductor.org/packages/3.15/bioc/vignettes/BiocCheck/inst/doc/BiocCheck.html#interpreting-bioccheck-output
BiocCheck FAILED.
merida1 BUILD BIN output
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===============================
R CMD BUILD
===============================
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=libdir APL_0.99.2.tar.gz'
>>>>>>>
* installing *source* package ‘APL’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (APL)