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URL: https://git.bioconductor.org/packages/epimutacions

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 20.04.4 LTS)/x86_64	ERROR	skipped	skipped	skipped
merida1	macOS 10.14.6 Mojave/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

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Package: epimutacions

Version: 0.99.31

RVersion: 4.2

BiocVersion: 3.15

BuildCommand: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data epimutacions

BuildTime: 0 minutes 0.72 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: epimutacions_20220411202218

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: epimutacions. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘epimutacions/DESCRIPTION’ ... OK
* preparing ‘epimutacions’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘epimutacions’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c mlm_init.c -o mlm_init.o
gcc -I"/home/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c ruben.c -o ruben.o
ruben.c:4:1: error: unknown type name ‘using’
    4 | using std::exp;
      | ^~~~~
ruben.c:4:10: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘:’ token
    4 | using std::exp;
      |          ^
ruben.c:5:1: error: unknown type name ‘using’
    5 | using std::log;
      | ^~~~~
ruben.c:5:10: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘:’ token
    5 | using std::log;
      |          ^
ruben.c:6:1: error: unknown type name ‘using’
    6 | using std::fabs;
      | ^~~~~
ruben.c:6:10: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘:’ token
    6 | using std::fabs;
      |          ^
ruben.c:7:1: error: unknown type name ‘using’
    7 | using std::sqrt;
      | ^~~~~
ruben.c:7:10: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘:’ token
    7 | using std::sqrt;
      |          ^
ruben.c:9:8: error: expected identifier or ‘(’ before string constant
    9 | extern "C" {
      |        ^~~
make: *** [/home/biocbuild/bbs-3.15-bioc/R/etc/Makeconf:168: ruben.o] Error 1
ERROR: compilation failed for package ‘epimutacions’
* removing ‘/tmp/RtmpokUfiz/Rinst327029d967f5a/epimutacions’
      -----------------------------------
ERROR: package installation failed

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output

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merida1 Summary

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Package: epimutacions

Version: 0.99.31

RVersion: 4.2

BiocVersion: 3.15

BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data epimutacions

BuildTime: 0 minutes 1.79 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: epimutacions_20220411202218

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: epimutacions. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

merida1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘epimutacions/DESCRIPTION’ ... OK
* preparing ‘epimutacions’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘epimutacions’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c mlm_init.c -o mlm_init.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c ruben.c -o ruben.o
ruben.c:4:1: error: unknown type name 'using'
using std::exp;
^
ruben.c:4:10: error: expected ';' after top level declarator
using std::exp;
         ^
         ;
ruben.c:4:11: error: expected identifier or '('
using std::exp;
          ^
ruben.c:5:1: error: unknown type name 'using'
using std::log;
^
ruben.c:5:10: error: expected ';' after top level declarator
using std::log;
         ^
         ;
ruben.c:5:11: error: expected identifier or '('
using std::log;
          ^
ruben.c:6:1: error: unknown type name 'using'
using std::fabs;
^
ruben.c:6:10: error: expected ';' after top level declarator
using std::fabs;
         ^
         ;
ruben.c:6:11: error: expected identifier or '('
using std::fabs;
          ^
ruben.c:7:1: error: unknown type name 'using'
using std::sqrt;
^
ruben.c:7:10: error: expected ';' after top level declarator
using std::sqrt;
         ^
         ;
ruben.c:7:11: error: expected identifier or '('
using std::sqrt;
          ^
ruben.c:9:8: error: expected identifier or '('
extern "C" {
       ^
13 errors generated.
make: *** [ruben.o] Error 1
ERROR: compilation failed for package ‘epimutacions’
* removing ‘/private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpDAitfT/Rinstbcdc7aed2921/epimutacions’
      -----------------------------------
ERROR: package installation failed

merida1 CHECK output

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merida1 BUILD BIN output

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