Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/speckle

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 22.04.1 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

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Package: speckle

Version: 0.99.3

RVersion: 4.3

BiocVersion: 3.17

BuildCommand: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data speckle

BuildTime: 0 minutes 9.40 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: speckle_20221201061127

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: speckle. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘speckle/DESCRIPTION’ ... OK
* preparing ‘speckle’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘speckle’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Warning: S3 methods ‘effectiveLibSizes.default’, ‘effectiveLibSizes.DGEList’, ‘effectiveLibSizes.DGEGLM’, ‘effectiveLibSizes.DGELRT’ were declared in NAMESPACE but not found
Error: object ‘effectiveLibSizes’ is not exported by 'namespace:edgeR'
Execution halted
ERROR: lazy loading failed for package ‘speckle’
* removing ‘/tmp/Rtmp6SstHZ/Rinst29e5486e10ba63/speckle’
      -----------------------------------
ERROR: package installation failed

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output

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