Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/LipidSigR

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 22.04.1 LTS)/x86_64	ERROR	skipped	skipped	skipped
merida1	macOS 10.14.6 Mojave/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

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Package: LipidSigR

Version: 0.99.3

RVersion: 4.3

BiocVersion: 3.17

BuildCommand: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data LipidSigR

BuildTime: 0 minutes 0.79 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: LipidSigR_20230113032000

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: LipidSigR. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘LipidSigR/DESCRIPTION’ ... OK
* preparing ‘LipidSigR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘LipidSigR’ ...
** using staged installation
** R
Error in parse(outFile) : 
  /tmp/Rtmpu8laez/Rbuild2c6ed993f5cf/LipidSigR/R/model_for_net.R:84:7: unexpected SPECIAL
83:       varimp <- stats::coef(best_model[[num]],s = 'lambda.min') 
84:       %>%
          ^
ERROR: unable to collate and parse R files for package ‘LipidSigR’
* removing ‘/tmp/Rtmpu8laez/Rinst2c6ed948471771/LipidSigR’
      -----------------------------------
ERROR: package installation failed

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output

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merida1 Summary

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Package: LipidSigR

Version: 0.99.3

RVersion: 4.3

BiocVersion: 3.17

BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data LipidSigR

BuildTime: 0 minutes 2.00 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: LipidSigR_20230113032000

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: LipidSigR. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

merida1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘LipidSigR/DESCRIPTION’ ... OK
* preparing ‘LipidSigR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘LipidSigR’ ...
** using staged installation
** R
Error in parse(outFile) : 
  /private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpDbrzit/Rbuild17ee53a741396/LipidSigR/R/model_for_net.R:84:7: unexpected SPECIAL
83:       varimp <- stats::coef(best_model[[num]],s = 'lambda.min') 
84:       %>%
          ^
ERROR: unable to collate and parse R files for package ‘LipidSigR’
* removing ‘/private/var/folders/7y/c__3_48d5y18p1_rhfs_4x9c0000gt/T/RtmpDbrzit/Rinst17ee51ab1fad5/LipidSigR’
      -----------------------------------
ERROR: package installation failed

merida1 CHECK output

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merida1 BUILD BIN output

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