Bioconductor Single Package Builder - Build History

Snapshot Date: 
URL:  https://git.bioconductor.org/packages/spicyWorkflow
Last Changed Rev:  / Revision: 
Last Changed Date: 

Hostname OS /Arch BUILD CHECK BUILD BIN POST-PROCESSING
merida1 macOS 10.14.6 Mojave/x86_64   TIMEOUT     skipped     skipped     skipped  
nebbiolo1 Linux (Ubuntu 22.04.1 LTS)/x86_64   ERROR     skipped     skipped     skipped  

merida1 Summary

[top]

Package: spicyWorkflow
Version: 0.99.1
RVersion: 4.3
BiocVersion: 3.17
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data spicyWorkflow
BuildTime: 120 minutes 37.41 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: spicyWorkflow_20230331124017
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: spicyWorkflow. Starting Build package.
PostProcessing: Finished Git clone. Package type: Workflow. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: -9.

merida1 BUILD SRC output

[top]

===============================

 R CMD BUILD

===============================

* checking for file ‘spicyWorkflow/DESCRIPTION’ ... OK
* preparing ‘spicyWorkflow’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
TIMEOUT: R CMD build exceeded 120 mins

merida1 CHECK output

[top]


                				
 

                            
 
                                
                				
merida1 BUILD BIN output
 
                    			
[top]

                				
 
                					

                				
 
                
		    
		        			

                			
                			
nebbiolo1 Summary
 
                			
[top]

                			
 
                				
 
						        
Package: spicyWorkflow
 
                					
Version: 0.99.1
 
                					
RVersion: 4.3
                
 
                					
BiocVersion: 3.17
                
 

                					
BuildCommand: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data spicyWorkflow
 
                					
BuildTime: 3 minutes 6.35 seconds
 
                					
CheckCommand: 

   							
CheckTime: 

                 					
BuildBinCommand: 

 							
BuildBinTime: 

                					
PackageFileSize: -1.00 KiB
 
                					
BuildID:: spicyWorkflow_20230331124017
 
                					
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: spicyWorkflow. Starting Build package. 
 
                					
PostProcessing: Finished Git clone. Package type: Workflow. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1. 
        				
                				
 
                			
 
                			
 
                			    
                				
nebbiolo1 BUILD SRC output
 
                    			
[top]

                				
 
                					
===============================

 R CMD BUILD

===============================

* checking for file ‘spicyWorkflow/DESCRIPTION’ ... OK
* preparing ‘spicyWorkflow’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘spicyWorkflow.Rmd’ using rmarkdown
Quitting from lines 185-196 (spicyWorkflow.Rmd) 
Error: processing vignette 'spicyWorkflow.Rmd' failed with diagnostics:
wrong args for environment subassignment
--- failed re-building ‘spicyWorkflow.Rmd’

SUMMARY: processing the following file failed:
  ‘spicyWorkflow.Rmd’

Error: Vignette re-building failed.
Execution halted


                				
 

                			
 
                			    
                				
nebbiolo1 CHECK output
 
                    			
[top]

                				
 
                					

                				
 

                            
 
                                
                				
nebbiolo1 BUILD BIN output
 
                    			
[top]