===============================
R CMD BUILD
===============================
* checking for file ‘adverSCarial/DESCRIPTION’ ... OK
* preparing ‘adverSCarial’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘vign01_adverSCarial.Rmd’ using knitr
Quitting from lines 87-88 (vign01_adverSCarial.Rmd)
Error: processing vignette 'vign01_adverSCarial.Rmd' failed with diagnostics:
The argument clusters must be a vector of character.
--- failed re-building ‘vign01_adverSCarial.Rmd’
--- re-building ‘vign02_overView_analysis.Rmd’ using knitr
Quitting from lines 74-75 (vign02_overView_analysis.Rmd)
Error: processing vignette 'vign02_overView_analysis.Rmd' failed with diagnostics:
The argument clusters must be a vector of character.
--- failed re-building ‘vign02_overView_analysis.Rmd’
--- re-building ‘vign03_adapt_classifier.Rmd’ using knitr
Warning in file.info(x, extra_cols = FALSE) :
expanded path length 12350 would be too long for
<p>title: “adverSCarial, generate and analyze the vulnerability of scRNA-seq
classifiers to adversarial attacks”
shorttitle: “adverSCarial”
author: Ghislain FIEVET <a href="mailto:ghislain.fievet@gmail.com">ghislain.fievet@gmail.com</a>
package: adverSCarial
abstract: >
adverSCarial is an R Package designed for generating and analyzing the vulnerability of scRNA-seq
classifiers to adversarial attacks. The package is versatile and provides a format for integrating
any type of classifier. It offers functions for studying and generating two types of attacks,
min change attack and max change attack. The min change attack involves making a small modification
to the input to alter the classification. The max change attack involves making a large modification
to the input without changing its classification.
The package provides a comprehensive solution for evaluating the robustness of scRNA-seq classifiers
against adversarial attack [... truncated]
--- finished re-building ‘vign03_adapt_classifier.Rmd’
--- re-building ‘vign04_advRandWalkMinChange.Rmd’ using knitr
Warning in file.info(x, extra_cols = FALSE) :
expanded path length 15745 would be too long for
<p>title: “adverSCarial, generate and analyze the vulnerability of scRNA-seq
classifiers to adversarial attacks”
shorttitle: “adverSCarial”
author: Ghislain FIEVET <a href="mailto:ghislain.fievet@gmail.com">ghislain.fievet@gmail.com</a>
package: adverSCarial
abstract: >
adverSCarial is an R Package designed for generating and analyzing the vulnerability of scRNA-seq
classifiers to adversarial attacks. The package is versatile and provides a format for integrating
any type of classifier. It offers functions for studying and generating two types of attacks,
min change attack and max change attack. The min change attack involves making a small modification
to the input to alter the classification. The max change attack involves making a large modification
to the input without changing its classification.
The package provides a comprehensive solution for evaluating the robustness of scRNA-seq classifiers
against adversarial attack [... truncated]
--- finished re-building ‘vign04_advRandWalkMinChange.Rmd’
SUMMARY: processing the following files failed:
‘vign01_adverSCarial.Rmd’ ‘vign02_overView_analysis.Rmd’
Error: Vignette re-building failed.
Execution halted
===============================
R CMD BUILD
===============================
* checking for file ‘adverSCarial/DESCRIPTION’ ... OK
* preparing ‘adverSCarial’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘vign01_adverSCarial.Rmd’ using knitr
Quitting from lines 87-88 (vign01_adverSCarial.Rmd)
Error: processing vignette 'vign01_adverSCarial.Rmd' failed with diagnostics:
The argument clusters must be a vector of character.
--- failed re-building ‘vign01_adverSCarial.Rmd’
--- re-building ‘vign02_overView_analysis.Rmd’ using knitr
Quitting from lines 74-75 (vign02_overView_analysis.Rmd)
Error: processing vignette 'vign02_overView_analysis.Rmd' failed with diagnostics:
The argument clusters must be a vector of character.
--- failed re-building ‘vign02_overView_analysis.Rmd’
--- re-building ‘vign03_adapt_classifier.Rmd’ using knitr
Warning in file.info(x, extra_cols = FALSE) :
expanded path length 12350 would be too long for
<p>title: “adverSCarial, generate and analyze the vulnerability of scRNA-seq
classifiers to adversarial attacks”
shorttitle: “adverSCarial”
author: Ghislain FIEVET <a href="mailto:ghislain.fievet@gmail.com">ghislain.fievet@gmail.com</a>
package: adverSCarial
abstract: >
adverSCarial is an R Package designed for generating and analyzing the vulnerability of scRNA-seq
classifiers to adversarial attacks. The package is versatile and provides a format for integrating
any type of classifier. It offers functions for studying and generating two types of attacks,
min change attack and max change attack. The min change attack involves making a small modification
to the input to alter the classification. The max change attack involves making a large modification
to the input without changing its classification.
The package provides a comprehensive solution for evaluating the robustness of scRNA-seq classifiers
against adversarial attack [... truncated]
--- finished re-building ‘vign03_adapt_classifier.Rmd’
--- re-building ‘vign04_advRandWalkMinChange.Rmd’ using knitr
Warning in file.info(x, extra_cols = FALSE) :
expanded path length 15745 would be too long for
<p>title: “adverSCarial, generate and analyze the vulnerability of scRNA-seq
classifiers to adversarial attacks”
shorttitle: “adverSCarial”
author: Ghislain FIEVET <a href="mailto:ghislain.fievet@gmail.com">ghislain.fievet@gmail.com</a>
package: adverSCarial
abstract: >
adverSCarial is an R Package designed for generating and analyzing the vulnerability of scRNA-seq
classifiers to adversarial attacks. The package is versatile and provides a format for integrating
any type of classifier. It offers functions for studying and generating two types of attacks,
min change attack and max change attack. The min change attack involves making a small modification
to the input to alter the classification. The max change attack involves making a large modification
to the input without changing its classification.
The package provides a comprehensive solution for evaluating the robustness of scRNA-seq classifiers
against adversarial attack [... truncated]
--- finished re-building ‘vign04_advRandWalkMinChange.Rmd’
SUMMARY: processing the following files failed:
‘vign01_adverSCarial.Rmd’ ‘vign02_overView_analysis.Rmd’
Error: Vignette re-building failed.
Execution halted