Bioconductor Single Package Builder - Build History
nebbiolo2 Summary
Package: SurfR |
Version: 0.99.10 |
RVersion: 4.3 |
BiocVersion: 3.18 |
BuildCommand: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SurfR |
BuildTime: 0 minutes 54.26 seconds |
CheckCommand: |
CheckTime: |
BuildBinCommand: |
BuildBinTime: |
PackageFileSize: -1.00 KiB |
BuildID:: SurfR_20230926163356 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: SurfR. Starting Build package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1. |
nebbiolo2 BUILD SRC output
=============================== R CMD BUILD =============================== * checking for file ‘SurfR/DESCRIPTION’ ... OK * preparing ‘SurfR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Intro_to_SurfR.Rmd’ using rmarkdown Quitting from lines 69-76 [setup] (Intro_to_SurfR.Rmd) Error: processing vignette 'Intro_to_SurfR.Rmd' failed with diagnostics: undefined columns selected --- failed re-building ‘Intro_to_SurfR.Rmd’ SUMMARY: processing the following file failed: ‘Intro_to_SurfR.Rmd’ Error: Vignette re-building failed. Execution halted
nebbiolo2 CHECK output
nebbiolo2 BUILD BIN output
lconway Summary
Package: SurfR |
Version: 0.99.10 |
RVersion: 4.3 |
BiocVersion: 3.18 |
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SurfR |
BuildTime: 0 minutes 40.73 seconds |
CheckCommand: |
CheckTime: |
BuildBinCommand: |
BuildBinTime: |
PackageFileSize: -1.00 KiB |
BuildID:: SurfR_20230926163356 |
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: SurfR. Starting Build package. |
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1. |
lconway BUILD SRC output
=============================== R CMD BUILD =============================== * checking for file ‘SurfR/DESCRIPTION’ ... OK * preparing ‘SurfR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Intro_to_SurfR.Rmd’ using rmarkdown Quitting from lines 69-76 [setup] (Intro_to_SurfR.Rmd) Error: processing vignette 'Intro_to_SurfR.Rmd' failed with diagnostics: undefined columns selected --- failed re-building ‘Intro_to_SurfR.Rmd’ SUMMARY: processing the following file failed: ‘Intro_to_SurfR.Rmd’ Error: Vignette re-building failed. Execution halted