Bioconductor Single Package Builder - Build History

Snapshot Date: 
URL:  https://git.bioconductor.org/packages/Pedixplorer
Last Changed Rev:  / Revision: 
Last Changed Date: 

Hostname OS /Arch BUILD CHECK BUILD BIN POST-PROCESSING
nebbiolo2 Linux (Ubuntu 22.04.2 LTS)/x86_64   ERROR     skipped     skipped     skipped  
lconway macOS 12.6.5 Monterey/x86_64   ERROR     skipped     skipped     skipped  

nebbiolo2 Summary

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Package: Pedixplorer
Version: 0.99.1
RVersion: 4.3
BiocVersion: 3.18
BuildCommand: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Pedixplorer
BuildTime: 0 minutes 0.64 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: Pedixplorer_20231012152718
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: Pedixplorer. Starting Build package.
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

nebbiolo2 BUILD SRC output

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 R CMD BUILD

===============================

* checking for file ‘Pedixplorer/DESCRIPTION’ ... OK
* preparing ‘Pedixplorer’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘Pedixplorer’ ...
** using staged installation
** R
Error in .install_package_code_files(".", instdir) : 
files in 'Collate' field missing from '/tmp/RtmpUBnqxT/Rbuild203d545ecc7d79/Pedixplorer/R':
  Pedigree.R
ERROR: unable to collate and parse R files for package ‘Pedixplorer’
* removing ‘/tmp/RtmpUBnqxT/Rinst203d5451c0b424/Pedixplorer’
      -----------------------------------
ERROR: package installation failed

nebbiolo2 CHECK output

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nebbiolo2 BUILD BIN output
 
                    			
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lconway Summary
 
                			
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Package: Pedixplorer
 
                					
Version: 0.99.1
 
                					
RVersion: 4.3
                
 
                					
BiocVersion: 3.18
                
 

                					
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data Pedixplorer
 
                					
BuildTime: 0 minutes 0.84 seconds
 
                					
CheckCommand: 

   							
CheckTime: 

                 					
BuildBinCommand: 

 							
BuildBinTime: 

                					
PackageFileSize: -1.00 KiB
 
                					
BuildID:: Pedixplorer_20231012152718
 
                					
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: Pedixplorer. Starting Build package. 
 
                					
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1. 
        				
                				
 
                			
 
                			
 
                			    
                				
lconway BUILD SRC output
 
                    			
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===============================

 R CMD BUILD

===============================

* checking for file ‘Pedixplorer/DESCRIPTION’ ... OK
* preparing ‘Pedixplorer’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘Pedixplorer’ ...
** using staged installation
** R
Error in .install_package_code_files(".", instdir) : 
files in 'Collate' field missing from '/private/var/folders/db/d7_0z9ss4n3692ppdmx9hlgr0000gv/T/RtmpCzcnzT/Rbuilde9f36a164325/Pedixplorer/R':
  Pedigree.R
ERROR: unable to collate and parse R files for package ‘Pedixplorer’
* removing ‘/private/var/folders/db/d7_0z9ss4n3692ppdmx9hlgr0000gv/T/RtmpCzcnzT/Rinste9f35b92688c/Pedixplorer’
      -----------------------------------
ERROR: package installation failed


                				
 

                			
 
                			    
                				
lconway CHECK output
 
                    			
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lconway BUILD BIN output
 
                    			
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