Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/knowYourCG

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 22.04.2 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

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Package: knowYourCG

Version: 0.99.4

RVersion: 4.4

BiocVersion: 3.19

BuildCommand: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data knowYourCG

BuildTime: 0 minutes 23.44 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: knowYourCG_20231117161652

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: knowYourCG. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘knowYourCG/DESCRIPTION’ ... OK
* preparing ‘knowYourCG’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘KYCG.Rmd’ using rmarkdown

Quitting from lines 45-47 [ky2] (KYCG.Rmd)
Error: processing vignette 'KYCG.Rmd' failed with diagnostics:

| File KYCG.MM285.designGroup.20210210 needs to be cached to be used in sesame.
| Please make sure you have updated ExperimentHub and try
| > sesameDataCache()
| to retrieve and cache needed sesame data.
--- failed re-building ‘KYCG.Rmd’

SUMMARY: processing the following file failed:
  ‘KYCG.Rmd’

Error: Vignette re-building failed.
Execution halted

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output

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