Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/Ribostan

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 22.04.2 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

[top]

Package: Ribostan

Version: 0.99.1

RVersion: 4.4

BiocVersion: 3.19

BuildCommand: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Ribostan

BuildTime: 0 minutes 0.60 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: Ribostan_20231130142753

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: Ribostan. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

nebbiolo1 BUILD SRC output

[top]

===============================

 R CMD BUILD

===============================

* checking for file ‘Ribostan/DESCRIPTION’ ... OK
* preparing ‘Ribostan’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘Ribostan’ ...
** using staged installation
** R
Error in parse(...) : 
  /tmp/RtmpZlZOaK/Rbuild29bbb62b74c6ce/Ribostan/R/anno.R:264:29: unexpected symbol
263:     GenomicFeatures::extractTranscriptSeqs(x = fafileob, .) %>%
264:     Biostrings::translate(. if.fuzzy.codon
                                 ^
ERROR: unable to collate and parse R files for package ‘Ribostan’
* removing ‘/tmp/RtmpZlZOaK/Rinst29bbb620d20860/Ribostan’
      -----------------------------------
ERROR: package installation failed

nebbiolo1 CHECK output

[top]

nebbiolo1 BUILD BIN output

[top]