Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/TransOmicsData

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 22.04.2 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

[top]

Package: TransOmicsData

Version: 0.99.0

RVersion: 4.4

BiocVersion: 3.19

BuildCommand: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TransOmicsData

BuildTime: 0 minutes 22.66 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: TransOmicsData_20240126164207

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: TransOmicsData. Starting Build package.

PostProcessing: Finished Git clone. Package type: ExperimentData. Installing dependency status: 0. Checking git clone status: 1. Installing package status: 0. Build Package status: 1.

nebbiolo1 BUILD SRC output

[top]

===============================

 R CMD BUILD

===============================

* checking for file ‘TransOmicsData/DESCRIPTION’ ... OK
* preparing ‘TransOmicsData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘TransOmicsData-vignette.Rmd’ using rmarkdown

Quitting from lines 36-37 [unnamed-chunk-2] (TransOmicsData-vignette.Rmd)
Error: processing vignette 'TransOmicsData-vignette.Rmd' failed with diagnostics:
could not find function "listDatasets"
--- failed re-building ‘TransOmicsData-vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘TransOmicsData-vignette.Rmd’

Error: Vignette re-building failed.
Execution halted

nebbiolo1 CHECK output

[top]

nebbiolo1 BUILD BIN output

[top]