Bioconductor Single Package Builder - Build History

Snapshot Date: 
URL:  https://git.bioconductor.org/packages/HicAggR
Last Changed Rev:  / Revision: 
Last Changed Date: 

Hostname OS /Arch BUILD CHECK BUILD BIN POST-PROCESSING
nebbiolo1 Linux (Ubuntu 22.04.3 LTS)/x86_64   ERROR     skipped     skipped     skipped  

nebbiolo1 Summary

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Package: HicAggR
Version: 0.99.6
RVersion: 4.4
BiocVersion: 3.19
BuildCommand: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data HicAggR
BuildTime: 1 minutes 41.98 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: HicAggR_20240426131805
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: HicAggR. Starting Build package.
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

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* checking for file ‘HicAggR/DESCRIPTION’ ... OK
* preparing ‘HicAggR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘HicAggR.Rmd’ using rmarkdown

Quitting from lines  at lines 72-97 [unnamed-chunk-5] (HicAggR.Rmd)
Error: processing vignette 'HicAggR.Rmd' failed with diagnostics:
unable to find an inherited method for function 'bfcpath' for signature 'x = "character"'
--- failed re-building ‘HicAggR.Rmd’

--- re-building ‘InDepth.Rmd’ using rmarkdown

Quitting from lines  at lines 180-201 [unnamed-chunk-9] (InDepth.Rmd)
Error: processing vignette 'InDepth.Rmd' failed with diagnostics:
unable to find an inherited method for function 'bfcpath' for signature 'x = "character"'
--- failed re-building ‘InDepth.Rmd’

SUMMARY: processing the following files failed:
  ‘HicAggR.Rmd’ ‘InDepth.Rmd’

Error: Vignette re-building failed.
Execution halted

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output
 
                    			
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