Bioconductor Single Package Builder - Build History

Snapshot Date: 
URL:  https://git.bioconductor.org/packages/mspms
Last Changed Rev:  / Revision: 
Last Changed Date: 

Hostname OS /Arch BUILD CHECK BUILD BIN POST-PROCESSING
lconway macOS 12.7.1 Monterey/x86_64   ERROR     skipped     skipped     skipped  

lconway Summary

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Package: mspms
Version: 0.99.0
RVersion: 4.4
BiocVersion: 3.20
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data mspms
BuildTime: 0 minutes 5.71 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: mspms_20240701143310
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: mspms. Starting Build package.
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

lconway BUILD SRC output

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 R CMD BUILD

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* checking for file ‘mspms/DESCRIPTION’ ... OK
* preparing ‘mspms’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘mspms_analysis.Rmd’ using rmarkdown

Quitting from lines 221-226 [unnamed-chunk-4] (mspms_analysis.Rmd)
Error: processing vignette 'mspms_analysis.Rmd' failed with diagnostics:
unable to load shared object '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so':
  dlopen(/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so, 0x0006): Symbol not found: (_iconv)
  Referenced from: '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so'
  Expected in: '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libR.dylib'
--- failed re-building ‘mspms_analysis.Rmd’

SUMMARY: processing the following file failed:
  ‘mspms_analysis.Rmd’

Error: Vignette re-building failed.
Execution halted

lconway CHECK output

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lconway BUILD BIN output
 
                    			
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