Bioconductor Single Package Builder - Build History

Snapshot Date: 
URL:  https://git.bioconductor.org/packages/AnVILGCP
Last Changed Rev:  / Revision: 
Last Changed Date: 

Hostname OS /Arch BUILD CHECK BUILD BIN POST-PROCESSING
nebbiolo2 Linux (Ubuntu 22.04.3 LTS)/x86_64   ERROR     skipped     skipped     skipped  
lconway macOS 12.7.1 Monterey/x86_64   ERROR     skipped     skipped     skipped  

nebbiolo2 Summary

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Package: AnVILGCP
Version: 0.99.26
RVersion: 4.4
BiocVersion: 3.20
BuildCommand: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data AnVILGCP
BuildTime: 0 minutes 8.13 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: AnVILGCP_20240702194415
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: AnVILGCP. Starting Build package.
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

nebbiolo2 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘AnVILGCP/DESCRIPTION’ ... OK
* preparing ‘AnVILGCP’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘AnVILGCPIntroduction.Rmd’ using rmarkdown

Quitting from lines 128-130 [unnamed-chunk-6] (AnVILGCPIntroduction.Rmd)
Error: processing vignette 'AnVILGCPIntroduction.Rmd' failed with diagnostics:
object 'has_gloud' not found
--- failed re-building ‘AnVILGCPIntroduction.Rmd’

SUMMARY: processing the following file failed:
  ‘AnVILGCPIntroduction.Rmd’

Error: Vignette re-building failed.
Execution halted

nebbiolo2 CHECK output

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nebbiolo2 BUILD BIN output

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lconway Summary

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Package: AnVILGCP
Version: 0.99.26
RVersion: 4.4
BiocVersion: 3.20
BuildCommand: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AnVILGCP
BuildTime: 0 minutes 8.79 seconds
CheckCommand:
CheckTime:
BuildBinCommand:
BuildBinTime:
PackageFileSize: -1.00 KiB
BuildID:: AnVILGCP_20240702194415
PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: AnVILGCP. Starting Build package.
PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

lconway BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘AnVILGCP/DESCRIPTION’ ... OK
* preparing ‘AnVILGCP’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘AnVILGCPIntroduction.Rmd’ using rmarkdown

Quitting from lines 128-130 [unnamed-chunk-6] (AnVILGCPIntroduction.Rmd)
Error: processing vignette 'AnVILGCPIntroduction.Rmd' failed with diagnostics:
object 'has_gloud' not found
--- failed re-building ‘AnVILGCPIntroduction.Rmd’

SUMMARY: processing the following file failed:
  ‘AnVILGCPIntroduction.Rmd’

Error: Vignette re-building failed.
Execution halted

lconway CHECK output

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lconway BUILD BIN output

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