Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/chevreul

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo2 Summary

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Package: chevreul

Version: 0.99.47

RVersion: 4.4

BiocVersion: 3.20

BuildCommand: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data chevreul

BuildTime: 3 minutes 13.33 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: chevreul_20240904204027

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: chevreul. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 0. Build Package status: 1.

nebbiolo2 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘chevreul/DESCRIPTION’ ... OK
* preparing ‘chevreul’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘chevreul.Rmd’ using rmarkdown
--- finished re-building ‘chevreul.Rmd’

--- re-building ‘shiny_app.Rmd’ using rmarkdown
--- finished re-building ‘shiny_app.Rmd’

--- re-building ‘visualization.Rmd’ using rmarkdown

Quitting from lines 144-149 [unnamed-chunk-5] (visualization.Rmd)
Error: processing vignette 'visualization.Rmd' failed with diagnostics:
'grch38' is not an exported object from 'namespace:chevreul'
--- failed re-building ‘visualization.Rmd’

SUMMARY: processing the following file failed:
  ‘visualization.Rmd’

Error: Vignette re-building failed.
Execution halted

nebbiolo2 CHECK output

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nebbiolo2 BUILD BIN output

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