Bioconductor Single Package Builder - Build History

Snapshot Date:

URL: https://git.bioconductor.org/packages/xCell2

Last Changed Rev: / Revision:

Last Changed Date:

Hostname	OS /Arch	BUILD	CHECK	BUILD BIN	POST-PROCESSING
nebbiolo1	Linux (Ubuntu 24.04.1 LTS)/x86_64	ERROR	skipped	skipped	skipped

nebbiolo1 Summary

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Package: xCell2

Version: 0.99.97

RVersion: 4.5

BiocVersion: 3.21

BuildCommand: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data xCell2

BuildTime: 0 minutes 11.08 seconds

CheckCommand:

CheckTime:

BuildBinCommand:

BuildBinTime:

PackageFileSize: -1.00 KiB

BuildID:: xCell2_20241218074245

PreProcessing: Starting Git clone. Installing dependencies. Checking Git Clone. Installing package: xCell2. Starting Build package.

PostProcessing: Finished Git clone. Package type: Software. Installing dependency status: 0. Checking git clone status: 0. Installing package status: 1. Build Package status: 1.

nebbiolo1 BUILD SRC output

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===============================

 R CMD BUILD

===============================

* checking for file ‘xCell2/DESCRIPTION’ ... OK
* preparing ‘xCell2’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘xCell2’ ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
Error in setMethod("getSignatures", "xCell2Object", function(object) object@signatures) : 
  no existing definition for function ‘getSignatures’
Error: unable to load R code in package ‘xCell2’
Execution halted
ERROR: lazy loading failed for package ‘xCell2’
* removing ‘/tmp/RtmpeKiVAl/Rinst197928cd5959f/xCell2’
      -----------------------------------
ERROR: package installation failed

nebbiolo1 CHECK output

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nebbiolo1 BUILD BIN output

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