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R CMD BUILD
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* checking for file ‘BreastSubtypeR/DESCRIPTION’ ... OK
* preparing ‘BreastSubtypeR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘BreastSubtypeR.Rmd’ using rmarkdown
Quitting from BreastSubtypeR.Rmd:91-116 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! package or namespace load failed for 'BreastSubtypeR' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'BiocGenerics'
---
Backtrace:
▆
1. └─base::library(BreastSubtypeR)
2. └─base::tryCatch(...)
3. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. └─value[[3L]](cond)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'BreastSubtypeR.Rmd' failed with diagnostics:
package or namespace load failed for 'BreastSubtypeR' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'BiocGenerics'
--- failed re-building ‘BreastSubtypeR.Rmd’
SUMMARY: processing the following file failed:
‘BreastSubtypeR.Rmd’
Error: Vignette re-building failed.
Execution halted